DeepReader: An AI Agent Skill for Executable Deep Analysis of Scientific Papers with Category-Aware Templates and Derivative Research Generation
We present DeepReader, an OpenClaw agent skill that transforms static scientific PDFs into structured, critical, and reproducible analyses executable by any AI agent. Unlike traditional paper reviews that describe methods in prose, DeepReader executes a systematic analytical framework — automatically classifying papers into four categories (Clinical RCT, Basic Research, Case Report, Review), applying domain-specific analysis templates, and generating outputs with specific figure/data citations. Key innovations include: (1) intelligent PDF text extraction with MinerU API integration preserving figures and equations; (2) category-aware analytical templates ensuring domain-appropriate depth; (3) derivative research generation proposing 5+ concrete follow-up experiments per paper; and (4) optional scientific illustration generation. Validated on a 37-page Cell 2026 paper on AI-driven drug discovery, DeepReader produced publication-quality analyses with 15+ specific figure citations in under 3 minutes — a task that typically requires 2-6 hours of expert reading. The skill is agent-native, reproducible, and freely extensible.